| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CLOAM1828 | rplC | CLOAM1828 | CLOAM1140 | Putative transporter fused subunits of ABC superfamily: ATP-binding components. | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.670 |
| CLOAM1828 | rplD | CLOAM1828 | CLOAM1139 | Putative transporter fused subunits of ABC superfamily: ATP-binding components. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.699 |
| CLOAM1828 | rplM | CLOAM1828 | CLOAM1894 | Putative transporter fused subunits of ABC superfamily: ATP-binding components. | 50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.690 |
| CLOAM1828 | rplT | CLOAM1828 | CLOAM0531 | Putative transporter fused subunits of ABC superfamily: ATP-binding components. | 50S ribosomal subunit protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.683 |
| CLOAM1828 | rplU | CLOAM1828 | CLOAM0293 | Putative transporter fused subunits of ABC superfamily: ATP-binding components. | 50S ribosomal subunit protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.695 |
| CLOAM1828 | rpmD | CLOAM1828 | CLOAM1122 | Putative transporter fused subunits of ABC superfamily: ATP-binding components. | 50S ribosomal subunit protein L30. | 0.681 |
| CLOAM1828 | rpmH | CLOAM1828 | CLOAM0547 | Putative transporter fused subunits of ABC superfamily: ATP-binding components. | Putative RNase P, protein component, involved in tRNA and 4.5S RNA-processing (RnpA); Function of homologous gene experimentally demonstrated in an other organism; putative enzyme; Belongs to the bacterial ribosomal protein bL34 family. | 0.674 |
| CLOAM1828 | rpsC | CLOAM1828 | CLOAM1134 | Putative transporter fused subunits of ABC superfamily: ATP-binding components. | 30S ribosomal subunit protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.689 |
| CLOAM1828 | rpsG | CLOAM1828 | CLOAM0453 | Putative transporter fused subunits of ABC superfamily: ATP-binding components. | 30S ribosomal subunit protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.675 |
| CLOAM1828 | rpsO | CLOAM1828 | CLOAM1474 | Putative transporter fused subunits of ABC superfamily: ATP-binding components. | 30S ribosomal subunit protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.683 |
| rplC | CLOAM1828 | CLOAM1140 | CLOAM1828 | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Putative transporter fused subunits of ABC superfamily: ATP-binding components. | 0.670 |
| rplC | rplD | CLOAM1140 | CLOAM1139 | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.999 |
| rplC | rplM | CLOAM1140 | CLOAM1894 | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.994 |
| rplC | rplT | CLOAM1140 | CLOAM0531 | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal subunit protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.989 |
| rplC | rplU | CLOAM1140 | CLOAM0293 | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal subunit protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.989 |
| rplC | rpmD | CLOAM1140 | CLOAM1122 | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 50S ribosomal subunit protein L30. | 0.996 |
| rplC | rpmH | CLOAM1140 | CLOAM0547 | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | Putative RNase P, protein component, involved in tRNA and 4.5S RNA-processing (RnpA); Function of homologous gene experimentally demonstrated in an other organism; putative enzyme; Belongs to the bacterial ribosomal protein bL34 family. | 0.911 |
| rplC | rpsC | CLOAM1140 | CLOAM1134 | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 30S ribosomal subunit protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.998 |
| rplC | rpsG | CLOAM1140 | CLOAM0453 | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 30S ribosomal subunit protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.989 |
| rplC | rpsO | CLOAM1140 | CLOAM1474 | 50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 30S ribosomal subunit protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.974 |
