STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fprANitric oxide reductase (Type A flavoprotein) (FMN-protein) (Flavoprotein A); Function of homologous gene experimentally demonstrated in an other organism; putative enzyme. (415 aa)    
Predicted Functional Partners:
dfx
Rubredoxin-dependent superoxide reductase (SOR) (desulfoferrodoxin); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.710
CLOAM1875
Hypothetical protein; No homology to any previously reported sequences.
     
 0.581
rbr
Rubrerythrin (RR) (rubredoxin-dependent,iron-containing peroxidase); Function of strongly homologous gene; enzyme.
 
  
 0.531
CLOAM1877
Putative formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. Belongs to the FPG family.
       0.506
rub
Rubredoxin-type Fe(Cys)4 protein; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the rubredoxin family.
 
  
 0.477
CLOAM1833
Hypothetical protein; No homology to any previously reported sequences.
   
    0.462
hgdC
Activator of (R)-2-hydroxyglutaryl-CoA dehydratase; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
     0.437
CLOAM1710
Hypothetical protein; No homology to any previously reported sequences.
 
     0.419
CLOAM0964
Putative dye-linked L-proline dehydrogenase (pdhA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.400
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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