Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CLOAM1885Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (612 aa)    
Predicted Functional Partners:
CLOAM1883
Putative Thiol-disulfide oxidoreductase (resA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.773
CLOAM1884
Hypothetical protein; No homology to any previously reported sequences.
       0.727
CLOAM1881
Hypothetical protein; No homology to any previously reported sequences.
       0.436
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.421
CLOAM1882
Hypothetical protein; Doubtful CDS.
       0.411
pyrH
Uridylate kinase (UK) (uridine monophosphate kinase) (UMP kinase); Catalyzes the reversible phosphorylation of UMP to UDP.
       0.409
Your Current Organism:
Cloacimonas acidaminovorans
NCBI taxonomy Id: 459349
Other names: C. Cloacimonas acidaminovorans str. Evry, Candidatus Cloacamonas acidaminovorans str. Evry, Candidatus Cloacimonas acidaminovorans str. Evry
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