STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG77250.1Pimeloyl-ACP methyl ester carboxylesterase. (284 aa)    
Predicted Functional Partners:
SDG74165.1
Alpha/beta hydrolase family protein.
  
     0.564
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.493
SDG77185.1
Anti-sigma-K factor RskA.
 
     0.487
SDI07221.1
Zn-dependent protease with chaperone function.
  
 0.436
SDH86959.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
 0.409
SDG77216.1
RNA polymerase, sigma subunit, SigZ; Belongs to the sigma-70 factor family. ECF subfamily.
       0.408
Your Current Organism:
Planomicrobium glaciei
NCBI taxonomy Id: 459472
Other names: CGMCC 1.6846, JCM 15088, P. glaciei, Planomicrobium glaciei Zhang et al. 2009, Planomicrobium sp. 0423, strain 0423
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.