STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG99570.1Heat induced stress protein YflT. (160 aa)    
Predicted Functional Partners:
sigB
RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.
   
  
 0.694
SDH03807.1
Protease I.
  
    0.664
SDG99612.1
15-methylpalmitoyl-4-hydroxy-2-pyrone synthase.
 
     0.627
SDG99525.1
Putative intracellular protease/amidase.
  
    0.613
SDG99647.1
15-methylpalmitoyl-4-hydroxy-2-pyrone 4-O-methyltransferase.
       0.572
SDH00511.1
Mg2+ and Co2+ transporter CorA.
  
    0.540
corA
Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
  
    0.540
SDG97389.1
Heat induced stress protein YflT.
 
  
 0.536
SDI28681.1
rsbT co-antagonist protein RsbR.
  
    0.500
SDH03325.1
Osmoprotectant transport system substrate-binding protein.
  
    0.485
Your Current Organism:
Planomicrobium glaciei
NCBI taxonomy Id: 459472
Other names: CGMCC 1.6846, JCM 15088, P. glaciei, Planomicrobium glaciei Zhang et al. 2009, Planomicrobium sp. 0423, strain 0423
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