Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PfkB | SDG83919.1 | SAMN04487975_108117 | SAMN04487975_101629 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | PTS system IIC component, Gat family. | 0.911 |
PfkB | SDI57238.1 | SAMN04487975_108117 | SAMN04487975_1214 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | Amidase. | 0.686 |
SDG71076.1 | SDI57238.1 | SAMN04487975_101255 | SAMN04487975_1214 | Glutamate synthase (NADPH/NADH) large chain. | Amidase. | 0.593 |
SDG71076.1 | gatB | SAMN04487975_101255 | SAMN04487975_12116 | Glutamate synthase (NADPH/NADH) large chain. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.470 |
SDG71076.1 | gatC | SAMN04487975_101255 | SAMN04487975_12118 | Glutamate synthase (NADPH/NADH) large chain. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.493 |
SDG71076.1 | gltX | SAMN04487975_101255 | SAMN04487975_11869 | Glutamate synthase (NADPH/NADH) large chain. | Nondiscriminating glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.710 |
SDG71076.1 | guaA | SAMN04487975_101255 | SAMN04487975_104251 | Glutamate synthase (NADPH/NADH) large chain. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.821 |
SDG83919.1 | PfkB | SAMN04487975_101629 | SAMN04487975_108117 | PTS system IIC component, Gat family. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.911 |
SDG83919.1 | SDI57238.1 | SAMN04487975_101629 | SAMN04487975_1214 | PTS system IIC component, Gat family. | Amidase. | 0.732 |
SDG83919.1 | gatB | SAMN04487975_101629 | SAMN04487975_12116 | PTS system IIC component, Gat family. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.408 |
SDI57238.1 | PfkB | SAMN04487975_1214 | SAMN04487975_108117 | Amidase. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.686 |
SDI57238.1 | SDG71076.1 | SAMN04487975_1214 | SAMN04487975_101255 | Amidase. | Glutamate synthase (NADPH/NADH) large chain. | 0.593 |
SDI57238.1 | SDG83919.1 | SAMN04487975_1214 | SAMN04487975_101629 | Amidase. | PTS system IIC component, Gat family. | 0.732 |
SDI57238.1 | SDI63296.1 | SAMN04487975_1214 | SAMN04487975_12344 | Amidase. | Antagonist of KipI. | 0.798 |
SDI57238.1 | asnS | SAMN04487975_1214 | SAMN04487975_10387 | Amidase. | asparaginyl-tRNA synthetase. | 0.623 |
SDI57238.1 | aspS | SAMN04487975_1214 | SAMN04487975_11336 | Amidase. | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.597 |
SDI57238.1 | gatB | SAMN04487975_1214 | SAMN04487975_12116 | Amidase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. | 0.992 |
SDI57238.1 | gatC | SAMN04487975_1214 | SAMN04487975_12118 | Amidase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.978 |
SDI57238.1 | gltX | SAMN04487975_1214 | SAMN04487975_11869 | Amidase. | Nondiscriminating glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.900 |
SDI57238.1 | guaA | SAMN04487975_1214 | SAMN04487975_104251 | Amidase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.589 |
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