STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKD10401.1Glycosyl transferase family 2. (330 aa)    
Predicted Functional Partners:
EKD10400.1
Hypothetical protein.
       0.551
EKD10402.1
Hypothetical protein.
       0.536
EKD11719.1
Glycosyl transferase group 1.
 
 
0.519
EKD10484.1
TPR repeat-containing protein.
 
 
 0.516
EKD07740.1
UDP-glucose 4-epimerase.
  
 
  0.503
thrS
threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
  0.468
thrS-2
threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
  0.468
EKD08163.1
Tetratricopeptide TPR_2 repeat protein.
 
     0.453
Your Current Organism:
Arthrospira platensis C1
NCBI taxonomy Id: 459495
Other names: A. platensis C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.