STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKD08951.1Surface antigen (D15). (75 aa)    
Predicted Functional Partners:
EKD08950.1
Surface antigen (D15).
 
     0.911
EKD08952.1
Polypeptide-transport-associated domain protein ShlB-type.
 
     0.890
EKD07061.1
Hypothetical protein.
 
 0.831
EKD07062.1
TPR repeat-containing protein.
  
     0.765
EKD07926.1
Hypothetical protein.
  
  
 0.739
EKD11648.1
Hypothetical protein.
  
    0.730
EKD08088.1
GAF sensor signal transduction histidine kinase.
  
     0.702
EKD07927.1
OmpA/MotB domain protein.
  
  
 0.655
EKD06790.1
Polysaccharide export protein.
  
  
  0.655
EKD11067.1
Hypothetical protein.
  
     0.653
Your Current Organism:
Arthrospira platensis C1
NCBI taxonomy Id: 459495
Other names: A. platensis C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.