STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKD08984.1N-6 DNA methylase. (679 aa)    
Predicted Functional Partners:
EKD08983.1
Restriction modification system DNA specificity domain protein.
  0.995
EKD08980.1
DEAD/DEAH box helicase.
 
   0.949
EKD09013.1
Restriction modification system DNA specificity domain protein.
  
  0.848
EKD10889.1
Type III restriction protein res subunit.
  
 0.823
EKD10899.1
Type I restriction enzyme EcoKI specificity protein.
  
  0.793
EKD06067.1
Putative type I restriction-modification system subunit S.
 
  0.788
uvrB
Excinuclease ABC B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
    
  0.765
EKD08981.1
Hypothetical protein.
       0.744
EKD08982.1
SMC domain protein.
       0.743
EKD11148.1
Restriction modification system DNA specificity domain protein.
   
  0.742
Your Current Organism:
Arthrospira platensis C1
NCBI taxonomy Id: 459495
Other names: A. platensis C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.