STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM44633.1Putative hydroxymethylpyrimidine transport system permease protein. (266 aa)    
Predicted Functional Partners:
SDM44659.1
Putative hydroxymethylpyrimidine transport system substrate-binding protein.
 
 0.994
SDM44608.1
Putative hydroxymethylpyrimidine transport system ATP-binding protein.
 
 0.986
SDM47985.1
Sulfonate transport system ATP-binding protein.
 
 0.916
SDM91617.1
NitT/TauT family transport system ATP-binding protein.
 
 0.903
SDM48045.1
Sulfonate transport system substrate-binding protein.
 
 
 0.895
ssuB
Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.871
SDM92734.1
Sulfonate transport system substrate-binding protein.
 
 
 0.867
SDM91600.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.780
SDM44589.1
Thiaminase (transcriptional activator TenA); Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.
 
    0.749
SDM44568.1
Acetylornithine deacetylase.
 
     0.729
Your Current Organism:
Fictibacillus solisalsi
NCBI taxonomy Id: 459525
Other names: Bacillus solisalsi, Bacillus solisalsi Liu et al. 2009, Bacillus sp. V11SED5, CGMCC 1.6854, F. solisalsi, Fictibacillus solisalsi (Liu et al. 2009) Glaeser et al. 2013, JCM 14863, KCTC 13181, strain YC1
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