STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM47405.1Multimeric flavodoxin WrbA. (211 aa)    
Predicted Functional Partners:
SDM69922.1
Ergothioneine biosynthesis protein EgtB.
 
     0.546
SDM63525.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
    
  0.537
SDM93627.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.511
cobT
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
    
  0.509
SDM93826.1
Luciferase family oxidoreductase, group 1.
  
  
  0.499
SDM47428.1
Thermolysin; Extracellular zinc metalloprotease.
       0.477
SDM93799.1
Luciferase family oxidoreductase, group 1.
  
  
  0.477
SDM46826.1
Luciferase family oxidoreductase, group 1.
  
  
  0.476
SDN35575.1
Putative serine protein kinase, PrkA.
   
    0.463
SDM48168.1
Uncharacterized membrane protein.
  
     0.444
Your Current Organism:
Fictibacillus solisalsi
NCBI taxonomy Id: 459525
Other names: Bacillus solisalsi, Bacillus solisalsi Liu et al. 2009, Bacillus sp. V11SED5, CGMCC 1.6854, F. solisalsi, Fictibacillus solisalsi (Liu et al. 2009) Glaeser et al. 2013, JCM 14863, KCTC 13181, strain YC1
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