STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM65757.1Protein of unknown function. (257 aa)    
Predicted Functional Partners:
SDM65778.1
Protein of unknown function.
  
    0.919
SDM95593.1
Uncharacterized conserved protein YutE, UPF0331/DUF86 family.
  
     0.739
SDM65791.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.690
SDM65721.1
Protein of unknown function.
 
     0.680
SDM88302.1
Succinate dehydrogenase subunit C.
  
     0.679
SDM67220.1
Membrane protein CcdC involved in cytochrome C biogenesis.
  
     0.654
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
    0.652
SDN41971.1
YwhD family protein.
  
     0.626
SDM65888.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
 
    0.563
SDM90326.1
Acetoin utilization protein AcuA.
  
     0.546
Your Current Organism:
Fictibacillus solisalsi
NCBI taxonomy Id: 459525
Other names: Bacillus solisalsi, Bacillus solisalsi Liu et al. 2009, Bacillus sp. V11SED5, CGMCC 1.6854, F. solisalsi, Fictibacillus solisalsi (Liu et al. 2009) Glaeser et al. 2013, JCM 14863, KCTC 13181, strain YC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.