STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM85757.1Nitrite reductase (NADH) small subunit. (101 aa)    
Predicted Functional Partners:
SDM85784.1
Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 0.999
SDM70099.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.937
SDM73660.1
Sulfide:quinone oxidoreductase.
  
 0.937
SDN32457.1
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.937
SDM85799.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
  
 0.908
SDM85742.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.876
SDM65888.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.804
SDN36295.1
Glyoxylase, beta-lactamase superfamily II.
  
 
 0.739
SDM66214.1
Glutamine synthetase.
     
 0.727
SDM73578.1
Phenylpropionate dioxygenase, large terminal subunit.
    
 0.692
Your Current Organism:
Fictibacillus solisalsi
NCBI taxonomy Id: 459525
Other names: Bacillus solisalsi, Bacillus solisalsi Liu et al. 2009, Bacillus sp. V11SED5, CGMCC 1.6854, F. solisalsi, Fictibacillus solisalsi (Liu et al. 2009) Glaeser et al. 2013, JCM 14863, KCTC 13181, strain YC1
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