Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM47096.1 | SDN02272.1 | SAMN04488137_0293 | SAMN04488137_3113 | Hypothetical protein. | Flagellar operon protein TIGR03826. | 0.933 |
SDM47096.1 | alaS | SAMN04488137_0293 | SAMN04488137_2297 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.936 |
SDM60256.1 | SDN02272.1 | SAMN04488137_0973 | SAMN04488137_3113 | Sulfotransferase domain-containing protein. | Flagellar operon protein TIGR03826. | 0.933 |
SDM60256.1 | alaS | SAMN04488137_0973 | SAMN04488137_2297 | Sulfotransferase domain-containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.934 |
SDM77227.1 | SDM86412.1 | SAMN04488137_1862 | SAMN04488137_2303 | Tetratricopeptide repeat-containing protein. | Tetratricopeptide repeat-containing protein. | 0.712 |
SDM77227.1 | SDN02272.1 | SAMN04488137_1862 | SAMN04488137_3113 | Tetratricopeptide repeat-containing protein. | Flagellar operon protein TIGR03826. | 0.942 |
SDM77227.1 | alaS | SAMN04488137_1862 | SAMN04488137_2297 | Tetratricopeptide repeat-containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.942 |
SDM86253.1 | alaS | SAMN04488137_2295 | SAMN04488137_2297 | Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.908 |
SDM86412.1 | SDM77227.1 | SAMN04488137_2303 | SAMN04488137_1862 | Tetratricopeptide repeat-containing protein. | Tetratricopeptide repeat-containing protein. | 0.712 |
SDM86412.1 | SDN02272.1 | SAMN04488137_2303 | SAMN04488137_3113 | Tetratricopeptide repeat-containing protein. | Flagellar operon protein TIGR03826. | 0.933 |
SDM86412.1 | alaS | SAMN04488137_2303 | SAMN04488137_2297 | Tetratricopeptide repeat-containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.951 |
SDN02272.1 | SDM47096.1 | SAMN04488137_3113 | SAMN04488137_0293 | Flagellar operon protein TIGR03826. | Hypothetical protein. | 0.933 |
SDN02272.1 | SDM60256.1 | SAMN04488137_3113 | SAMN04488137_0973 | Flagellar operon protein TIGR03826. | Sulfotransferase domain-containing protein. | 0.933 |
SDN02272.1 | SDM77227.1 | SAMN04488137_3113 | SAMN04488137_1862 | Flagellar operon protein TIGR03826. | Tetratricopeptide repeat-containing protein. | 0.942 |
SDN02272.1 | SDM86412.1 | SAMN04488137_3113 | SAMN04488137_2303 | Flagellar operon protein TIGR03826. | Tetratricopeptide repeat-containing protein. | 0.933 |
SDN02272.1 | SDN04847.1 | SAMN04488137_3113 | SAMN04488137_3242 | Flagellar operon protein TIGR03826. | Hypothetical protein. | 0.933 |
SDN02272.1 | alaS | SAMN04488137_3113 | SAMN04488137_2297 | Flagellar operon protein TIGR03826. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.992 |
SDN04847.1 | SDN02272.1 | SAMN04488137_3242 | SAMN04488137_3113 | Hypothetical protein. | Flagellar operon protein TIGR03826. | 0.933 |
SDN04847.1 | alaS | SAMN04488137_3242 | SAMN04488137_2297 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.936 |
alaS | SDM47096.1 | SAMN04488137_2297 | SAMN04488137_0293 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | Hypothetical protein. | 0.936 |
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