STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM92272.1Transcriptional regulator, GntR family. (243 aa)    
Predicted Functional Partners:
SDM92306.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.868
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
  
    0.779
SDM52965.1
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.
  
    0.639
SDM92246.1
PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1).
  
  
 0.583
SDM88204.1
PTS system D-glucose-specific IIA component, Glc family /PTS system D-glucose-specific IIB component, Glc family /PTS system D-glucose-specific IIC component, Glc family.
 
 
 0.570
SDN06544.1
AraC-type DNA-binding protein.
   
    0.541
SDN52253.1
AraC-type DNA-binding protein.
   
    0.541
SDM92327.1
Uncharacterized conserved protein YbbC, DUF1343 family.
       0.535
SDM92352.1
beta-N-acetylhexosaminidase.
       0.515
SDM92191.1
PTS system, N-acetylglucosamine-specific IIC component.
  
  
 0.506
Your Current Organism:
Fictibacillus solisalsi
NCBI taxonomy Id: 459525
Other names: Bacillus solisalsi, Bacillus solisalsi Liu et al. 2009, Bacillus sp. V11SED5, CGMCC 1.6854, F. solisalsi, Fictibacillus solisalsi (Liu et al. 2009) Glaeser et al. 2013, JCM 14863, KCTC 13181, strain YC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.