STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM96419.13-hydroxybutyrate dehydrogenase. (260 aa)    
Predicted Functional Partners:
SDM96383.1
3-oxoacid CoA-transferase subunit B.
  
 
  0.850
SDM70099.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.793
SDN32457.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.793
SDM96361.1
3-oxoacid CoA-transferase subunit A.
    
  0.782
SDM88204.1
PTS system D-glucose-specific IIA component, Glc family /PTS system D-glucose-specific IIB component, Glc family /PTS system D-glucose-specific IIC component, Glc family.
     
 0.754
SDM96393.1
H+/gluconate symporter.
 
    0.722
SDM79362.1
3-oxoacid CoA-transferase subunit B.
   
 
  0.709
SDM96325.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.698
SDN08005.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.653
SDM89461.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
  0.615
Your Current Organism:
Fictibacillus solisalsi
NCBI taxonomy Id: 459525
Other names: Bacillus solisalsi, Bacillus solisalsi Liu et al. 2009, Bacillus sp. V11SED5, CGMCC 1.6854, F. solisalsi, Fictibacillus solisalsi (Liu et al. 2009) Glaeser et al. 2013, JCM 14863, KCTC 13181, strain YC1
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