Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM55747.1 | SDM96593.1 | SAMN04488137_0743 | SAMN04488137_2823 | Allantoinase. | Xanthine permease. | 0.745 |
SDM55747.1 | carA | SAMN04488137_0743 | SAMN04488137_0914 | Allantoinase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.986 |
SDM55747.1 | carA-2 | SAMN04488137_0743 | SAMN04488137_1153 | Allantoinase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.985 |
SDM55747.1 | carB | SAMN04488137_0743 | SAMN04488137_0915 | Allantoinase. | Carbamoyl-phosphate synthase large subunit. | 0.987 |
SDM55747.1 | carB-2 | SAMN04488137_0743 | SAMN04488137_1154 | Allantoinase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.987 |
SDM55747.1 | pyrB | SAMN04488137_0743 | SAMN04488137_1151 | Allantoinase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
SDM55747.1 | pyrE | SAMN04488137_0743 | SAMN04488137_1158 | Allantoinase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.889 |
SDM55747.1 | pyrF | SAMN04488137_0743 | SAMN04488137_1157 | Allantoinase. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.822 |
SDM55747.1 | pyrR | SAMN04488137_0743 | SAMN04488137_1149 | Allantoinase. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.878 |
SDM96593.1 | SDM55747.1 | SAMN04488137_2823 | SAMN04488137_0743 | Xanthine permease. | Allantoinase. | 0.745 |
SDM96593.1 | carA | SAMN04488137_2823 | SAMN04488137_0914 | Xanthine permease. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.707 |
SDM96593.1 | carA-2 | SAMN04488137_2823 | SAMN04488137_1153 | Xanthine permease. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.707 |
SDM96593.1 | carB | SAMN04488137_2823 | SAMN04488137_0915 | Xanthine permease. | Carbamoyl-phosphate synthase large subunit. | 0.709 |
SDM96593.1 | carB-2 | SAMN04488137_2823 | SAMN04488137_1154 | Xanthine permease. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.709 |
SDM96593.1 | pyrB | SAMN04488137_2823 | SAMN04488137_1151 | Xanthine permease. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.834 |
SDM96593.1 | pyrE | SAMN04488137_2823 | SAMN04488137_1158 | Xanthine permease. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.791 |
SDM96593.1 | pyrF | SAMN04488137_2823 | SAMN04488137_1157 | Xanthine permease. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.801 |
SDM96593.1 | pyrR | SAMN04488137_2823 | SAMN04488137_1149 | Xanthine permease. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.834 |
SDM96593.1 | xpt | SAMN04488137_2823 | SAMN04488137_2824 | Xanthine permease. | Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.979 |
carA | SDM55747.1 | SAMN04488137_0914 | SAMN04488137_0743 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Allantoinase. | 0.986 |
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