STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM96670.1Acetoin utilization transport system permease protein. (441 aa)    
Predicted Functional Partners:
SDM96684.1
Acetoin utilization transport system ATP-binding protein.
 0.997
SDN10577.1
Bacitracin transport system ATP-binding protein.
 0.967
SDM51094.1
Putative ABC transport system ATP-binding protein.
 0.966
SDN55339.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.875
SDN10512.1
Binding-protein-dependent transport system inner membrane component.
  
  
  0.752
SDM51085.1
Putative ABC transport system permease protein.
  
 
 0.730
SDM58125.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.645
SDN27293.1
ABC-2 type transport system ATP-binding protein.
  
  
 0.641
SDN10806.1
Hypothetical protein.
  
     0.597
SDN03500.1
Hypothetical protein.
  
     0.591
Your Current Organism:
Fictibacillus solisalsi
NCBI taxonomy Id: 459525
Other names: Bacillus solisalsi, Bacillus solisalsi Liu et al. 2009, Bacillus sp. V11SED5, CGMCC 1.6854, F. solisalsi, Fictibacillus solisalsi (Liu et al. 2009) Glaeser et al. 2013, JCM 14863, KCTC 13181, strain YC1
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