STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN27161.1Hypothetical protein. (178 aa)    
Predicted Functional Partners:
SDN28967.1
Hypothetical protein.
  
     0.686
SDM44909.1
Hypothetical protein.
  
     0.623
SDM78811.1
Stage V sporulation protein AE.
  
     0.605
SDN45909.1
Protein of unknown function.
  
     0.589
SDM98268.1
Spore germination protein (amino acid permease).
  
     0.543
fapR
Acyl-coenzyme A thioesterase PaaI, contains HGG motif; Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism.
  
     0.514
SDN27182.1
3-oxoacyl-[acyl-carrier protein] reductase.
       0.498
SDM84383.1
Spore germination protein KC.
  
     0.430
SDN11599.1
Spore germination protein KB.
  
     0.404
SDN51629.1
Sporulation lipoprotein, YhcN/YlaJ family.
  
     0.404
Your Current Organism:
Fictibacillus solisalsi
NCBI taxonomy Id: 459525
Other names: Bacillus solisalsi, Bacillus solisalsi Liu et al. 2009, Bacillus sp. V11SED5, CGMCC 1.6854, F. solisalsi, Fictibacillus solisalsi (Liu et al. 2009) Glaeser et al. 2013, JCM 14863, KCTC 13181, strain YC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.