STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN27403.1Methyltransferase domain-containing protein. (201 aa)    
Predicted Functional Partners:
SDM96500.1
Putative copper resistance protein D.
  
     0.659
rsmI
16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.612
SDN03500.1
Hypothetical protein.
  
     0.544
SDN27381.1
Hypothetical protein.
       0.539
SDN36411.1
Hypothetical protein; Belongs to the 5'(3')-deoxyribonucleotidase family.
  
     0.535
SDN24587.1
Acetyltransferase (GNAT) domain-containing protein.
  
     0.528
SDN51652.1
Uncharacterized membrane protein.
  
     0.495
SDM47935.1
Hypothetical protein.
  
     0.412
SDM88263.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
   
   0.407
SDM50134.1
ROK family protein.
  
     0.400
Your Current Organism:
Fictibacillus solisalsi
NCBI taxonomy Id: 459525
Other names: Bacillus solisalsi, Bacillus solisalsi Liu et al. 2009, Bacillus sp. V11SED5, CGMCC 1.6854, F. solisalsi, Fictibacillus solisalsi (Liu et al. 2009) Glaeser et al. 2013, JCM 14863, KCTC 13181, strain YC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.