Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM47653.1 | SDN30156.1 | SAMN04488137_0321 | SAMN04488137_3999 | Putative zinc-finger. | Protein of unknown function. | 0.613 |
SDM82120.1 | SDN30156.1 | SAMN04488137_2086 | SAMN04488137_3999 | Hypothetical protein. | Protein of unknown function. | 0.558 |
SDN30135.1 | SDN30156.1 | SAMN04488137_3998 | SAMN04488137_3999 | Prephenate dehydratase. | Protein of unknown function. | 0.762 |
SDN30135.1 | SDN30171.1 | SAMN04488137_3998 | SAMN04488137_4000 | Prephenate dehydratase. | Hypothetical protein. | 0.741 |
SDN30135.1 | SDN30197.1 | SAMN04488137_3998 | SAMN04488137_4001 | Prephenate dehydratase. | Endonuclease I. | 0.741 |
SDN30156.1 | SDM47653.1 | SAMN04488137_3999 | SAMN04488137_0321 | Protein of unknown function. | Putative zinc-finger. | 0.613 |
SDN30156.1 | SDM82120.1 | SAMN04488137_3999 | SAMN04488137_2086 | Protein of unknown function. | Hypothetical protein. | 0.558 |
SDN30156.1 | SDN30135.1 | SAMN04488137_3999 | SAMN04488137_3998 | Protein of unknown function. | Prephenate dehydratase. | 0.762 |
SDN30156.1 | SDN30171.1 | SAMN04488137_3999 | SAMN04488137_4000 | Protein of unknown function. | Hypothetical protein. | 0.752 |
SDN30156.1 | SDN30197.1 | SAMN04488137_3999 | SAMN04488137_4001 | Protein of unknown function. | Endonuclease I. | 0.752 |
SDN30156.1 | SDN54166.1 | SAMN04488137_3999 | SAMN04488137_4820 | Protein of unknown function. | Transmembrane transcriptional regulator (anti-sigma factor RsiW). | 0.613 |
SDN30156.1 | rpoA | SAMN04488137_3999 | SAMN04488137_4976 | Protein of unknown function. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.626 |
SDN30156.1 | rpoB | SAMN04488137_3999 | SAMN04488137_5012 | Protein of unknown function. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.718 |
SDN30156.1 | rpoC | SAMN04488137_3999 | SAMN04488137_5011 | Protein of unknown function. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.737 |
SDN30156.1 | rpoZ | SAMN04488137_3999 | SAMN04488137_1164 | Protein of unknown function. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.626 |
SDN30171.1 | SDN30135.1 | SAMN04488137_4000 | SAMN04488137_3998 | Hypothetical protein. | Prephenate dehydratase. | 0.741 |
SDN30171.1 | SDN30156.1 | SAMN04488137_4000 | SAMN04488137_3999 | Hypothetical protein. | Protein of unknown function. | 0.752 |
SDN30171.1 | SDN30197.1 | SAMN04488137_4000 | SAMN04488137_4001 | Hypothetical protein. | Endonuclease I. | 0.773 |
SDN30197.1 | SDN30135.1 | SAMN04488137_4001 | SAMN04488137_3998 | Endonuclease I. | Prephenate dehydratase. | 0.741 |
SDN30197.1 | SDN30156.1 | SAMN04488137_4001 | SAMN04488137_3999 | Endonuclease I. | Protein of unknown function. | 0.752 |
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