Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDM69899.1 | SDN37951.1 | SAMN04488137_1504 | SAMN04488137_4270 | acyl-CoA thioesterase. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.961 |
| SDM69899.1 | SDN37968.1 | SAMN04488137_1504 | SAMN04488137_4271 | acyl-CoA thioesterase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. | 0.959 |
| SDM69899.1 | SDN37985.1 | SAMN04488137_1504 | SAMN04488137_4272 | acyl-CoA thioesterase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | 0.875 |
| SDM69899.1 | SDN38005.1 | SAMN04488137_1504 | SAMN04488137_4273 | acyl-CoA thioesterase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC. | 0.957 |
| SDM69899.1 | SDN38022.1 | SAMN04488137_1504 | SAMN04488137_4274 | acyl-CoA thioesterase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | 0.959 |
| SDM69899.1 | SDN38074.1 | SAMN04488137_1504 | SAMN04488137_4277 | acyl-CoA thioesterase. | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.559 |
| SDM69899.1 | SDN38145.1 | SAMN04488137_1504 | SAMN04488137_4281 | acyl-CoA thioesterase. | Transcriptional regulator, PaaX family. | 0.610 |
| SDM95890.1 | SDN38022.1 | SAMN04488137_2786 | SAMN04488137_4274 | Nitrogen fixation protein NifU. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | 0.844 |
| SDN37951.1 | SDM69899.1 | SAMN04488137_4270 | SAMN04488137_1504 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | acyl-CoA thioesterase. | 0.961 |
| SDN37951.1 | SDN37968.1 | SAMN04488137_4270 | SAMN04488137_4271 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. | 0.984 |
| SDN37951.1 | SDN37985.1 | SAMN04488137_4270 | SAMN04488137_4272 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | 0.953 |
| SDN37951.1 | SDN38005.1 | SAMN04488137_4270 | SAMN04488137_4273 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC. | 0.980 |
| SDN37951.1 | SDN38022.1 | SAMN04488137_4270 | SAMN04488137_4274 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | 0.978 |
| SDN37951.1 | SDN38037.1 | SAMN04488137_4270 | SAMN04488137_4275 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Conserved hypothetical protein. | 0.623 |
| SDN37951.1 | SDN38059.1 | SAMN04488137_4270 | SAMN04488137_4276 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.471 |
| SDN37951.1 | SDN38074.1 | SAMN04488137_4270 | SAMN04488137_4277 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.597 |
| SDN37951.1 | SDN38145.1 | SAMN04488137_4270 | SAMN04488137_4281 | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Transcriptional regulator, PaaX family. | 0.759 |
| SDN37968.1 | SDM69899.1 | SAMN04488137_4271 | SAMN04488137_1504 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. | acyl-CoA thioesterase. | 0.959 |
| SDN37968.1 | SDN37951.1 | SAMN04488137_4271 | SAMN04488137_4270 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.984 |
| SDN37968.1 | SDN37985.1 | SAMN04488137_4271 | SAMN04488137_4272 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | 0.999 |
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