STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN41816.1Uncharacterized beta-barrel protein YwiB, DUF1934 family. (147 aa)    
Predicted Functional Partners:
argS-2
arginyl-tRNA synthetase.
  
    0.932
argS
arginyl-tRNA synthetase.
  
    0.712
SDN01433.1
PDZ domain-containing protein.
  
     0.708
SDM86230.1
Uncharacterized protein YrzB, UPF0473 family; Belongs to the UPF0473 family.
  
     0.638
SDN41768.1
XapX domain-containing protein.
 
     0.623
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
   
    0.541
SDM62523.1
Uncharacterized protein YlbG, UPF0298 family.
  
     0.536
SDN61037.1
N-acetylglutamate synthase, GNAT family.
  
    0.524
SDM55481.1
Uncharacterized integral membrane protein.
  
     0.522
SDM66197.1
MerR family transcriptional regulator, glutamine synthetase repressor.
  
     0.497
Your Current Organism:
Fictibacillus solisalsi
NCBI taxonomy Id: 459525
Other names: Bacillus solisalsi, Bacillus solisalsi Liu et al. 2009, Bacillus sp. V11SED5, CGMCC 1.6854, F. solisalsi, Fictibacillus solisalsi (Liu et al. 2009) Glaeser et al. 2013, JCM 14863, KCTC 13181, strain YC1
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