STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN46117.1PTS system IID component, Man family (TC 4.A.6). (272 aa)    
Predicted Functional Partners:
SDN46097.1
PTS system, mannose-specific IIC component.
 0.999
SDN46283.1
PTS system, mannose-specific IIC component.
 0.999
SDN46069.1
PTS system, mannose-specific IIB component.
 
 0.995
SDN46056.1
PTS system, mannose-specific IIA component.
 
 0.994
SDN46257.1
PTS system, mannose-specific IIB component.
 
 0.990
SDN46234.1
PTS system, mannose-specific IIA component.
 
 0.988
SDM68647.1
Uncharacterized protein; PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4).
  
 
 0.978
SDN05859.1
Uncharacterized protein; PTS system mannosylglycerate-specific IIA component, Fru family (TC 4.A.2.1.3)/PTS system mannosylglycerate-specific IIB component, Fru family (TC 4.A.2.1.3)/PTS system mannosylglycerate-specific IIC component, Fru family (TC 4.A.2.1.3).
  
 
 0.978
SDN46166.1
Transcriptional regulatory protein LevR, contains PRD, AAA+ and EIIA domains.
 
  
 0.890
SDN29953.1
M protein trans-acting positive regulator (MGA) HTH domain-containing protein.
 
 
 0.839
Your Current Organism:
Fictibacillus solisalsi
NCBI taxonomy Id: 459525
Other names: Bacillus solisalsi, Bacillus solisalsi Liu et al. 2009, Bacillus sp. V11SED5, CGMCC 1.6854, F. solisalsi, Fictibacillus solisalsi (Liu et al. 2009) Glaeser et al. 2013, JCM 14863, KCTC 13181, strain YC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.