STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OppCOligopeptide transport system permease protein OppC. (352 aa)    
Predicted Functional Partners:
OppB
Oligopeptide transport system permease protein OppB.
 
 0.999
UF70_0590
Oligopeptide transport system permease protein OppB.
  
 0.994
UF70_0591
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
  
 0.993
UF70_0592
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA.
 
  
 0.975
UF70_2090
Oligopeptide transport ATP-binding protein OppF.
  
 0.948
UF70_2079
Oligopeptide transport ATP-binding protein OppF.
  
 0.897
UF70_2092
Nickel transport system permease protein NikB.
  
 0.881
UF70_0959
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
  
 0.877
UF70_2080
Putative glutathione transporter, permease component.
  
 0.876
UF70_0957
ABC-type dipeptide/oligopeptide/nickel transport system, ATP-binding protein.
  
 0.823
Your Current Organism:
Staphylococcus pasteuri
NCBI taxonomy Id: 45972
Other names: ATCC 51129, CCUG 32420, CIP 103540, DSM 10656, S. pasteuri, strain BM9357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.