STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UF70_1059Ferredoxin. (82 aa)    
Predicted Functional Partners:
UF70_1057
ATP-dependent DNA helicase, RecQ family.
       0.801
UF70_1058
Hypothetical protein.
       0.801
UF70_0876
Hypothetical protein; Belongs to the UPF0342 family.
  
     0.622
UF70_0712
ComK regulator; Belongs to the UPF0342 family.
  
     0.613
UF70_1039
Putative transmembrane protein CDS_ID OB1773.
  
     0.546
pcrB
(S)-3-O-geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales.
  
     0.520
UF70_0705
Putative protein YlaN; Belongs to the UPF0358 family.
  
     0.496
UF70_0543
Hypothetical protein; Belongs to the UPF0349 family.
  
     0.487
UF70_1056
Elastin binding protein EbpS.
       0.463
UF70_0871
2-oxoglutarate oxidoreductase, alpha subunit.
     
 0.455
Your Current Organism:
Staphylococcus pasteuri
NCBI taxonomy Id: 45972
Other names: ATCC 51129, CCUG 32420, CIP 103540, DSM 10656, S. pasteuri, strain BM9357
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