STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UF70_1123Hypothetical protein. (70 aa)    
Predicted Functional Partners:
UF70_1122
Glucokinase.
  
    0.878
UF70_1120
Hydroxyacylglutathione hydrolase.
       0.869
UF70_1121
Hypothetical protein.
       0.869
UF70_1124
Rhomboid family serine protease.
       0.869
UF70_1125
5-formyltetrahydrofolate cyclo-ligase.
       0.869
UF70_1119
Late competence protein ComGA, access of DNA to ComEA.
       0.766
rpmG-2
LSU ribosomal protein L33p; Belongs to the bacterial ribosomal protein bL33 family.
       0.752
UF70_1115
Late competence protein ComGD.
       0.749
UF70_1113
Late competence protein ComGF.
       0.701
aroK
Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.690
Your Current Organism:
Staphylococcus pasteuri
NCBI taxonomy Id: 45972
Other names: ATCC 51129, CCUG 32420, CIP 103540, DSM 10656, S. pasteuri, strain BM9357
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