STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UF70_1721Substrate-binding protein OpuCC. (317 aa)    
Predicted Functional Partners:
OpuCB
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB.
  
 0.999
OpuCD
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD.
  
 0.999
UF70_1719
ATP-binding protein OpuCA.
 
 
 0.989
UF70_0414
L-proline glycine betaine binding ABC transporter protein ProX.
 
 
0.959
UF70_0413
Glycine betaine ABC transport system, ATP-binding protein OpuAA.
 
 
 0.914
UF70_2290
Hypothetical protein.
  
    0.504
UF70_1528
L-proline glycine betaine ABC transport system permease protein ProW.
   
 
 0.440
potA
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 
  0.401
Your Current Organism:
Staphylococcus pasteuri
NCBI taxonomy Id: 45972
Other names: ATCC 51129, CCUG 32420, CIP 103540, DSM 10656, S. pasteuri, strain BM9357
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.