STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UF70_2003Scaffold protein for [4Fe-4S] cluster assembly ApbC; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (354 aa)    
Predicted Functional Partners:
UF70_1151
tRNA-t(6)A37 methylthiotransferase.
  
   
 0.606
miaB
tRNA-i(6)A37 methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
 
   
 0.561
nrdR
Ribonucleotide reductase transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
     
 0.548
UF70_0803
Serine/threonine protein kinase PrkC, regulator of stationary phase.
   
 
 0.524
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
 
 
 
 0.512
UF70_0290
Hypothetical protein.
  
     0.511
UF70_2002
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
       0.503
UF70_0210
Thiol peroxidase, Bcp-type.
 
  
 0.472
sepA
SmrB; Involved in multidrug efflux. Belongs to the multidrug resistance efflux pump SepA family.
       0.467
UF70_0544
Putative iron binding protein from the HesB_IscA_SufA family; Belongs to the HesB/IscA family.
 
 
 0.462
Your Current Organism:
Staphylococcus pasteuri
NCBI taxonomy Id: 45972
Other names: ATCC 51129, CCUG 32420, CIP 103540, DSM 10656, S. pasteuri, strain BM9357
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