Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
UF70_0813 | UF70_2101 | UF70_0813 | UF70_2101 | Malonyl CoA-acyl carrier protein transacylase. | Zinc-containing alcohol dehydrogenase. | 0.651 |
UF70_2100 | UF70_2101 | UF70_2100 | UF70_2101 | ThiJ/PfpI family protein. | Zinc-containing alcohol dehydrogenase. | 0.744 |
UF70_2100 | UF70_2102 | UF70_2100 | UF70_2102 | ThiJ/PfpI family protein. | YDGG protein. | 0.653 |
UF70_2100 | rbsK | UF70_2100 | UF70_2103 | ThiJ/PfpI family protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.402 |
UF70_2101 | UF70_0813 | UF70_2101 | UF70_0813 | Zinc-containing alcohol dehydrogenase. | Malonyl CoA-acyl carrier protein transacylase. | 0.651 |
UF70_2101 | UF70_2100 | UF70_2101 | UF70_2100 | Zinc-containing alcohol dehydrogenase. | ThiJ/PfpI family protein. | 0.744 |
UF70_2101 | UF70_2102 | UF70_2101 | UF70_2102 | Zinc-containing alcohol dehydrogenase. | YDGG protein. | 0.712 |
UF70_2101 | rbsK | UF70_2101 | UF70_2103 | Zinc-containing alcohol dehydrogenase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.471 |
UF70_2101 | trmD | UF70_2101 | UF70_0823 | Zinc-containing alcohol dehydrogenase. | tRNA (Guanine37-N1) -methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.444 |
UF70_2102 | UF70_2100 | UF70_2102 | UF70_2100 | YDGG protein. | ThiJ/PfpI family protein. | 0.653 |
UF70_2102 | UF70_2101 | UF70_2102 | UF70_2101 | YDGG protein. | Zinc-containing alcohol dehydrogenase. | 0.712 |
UF70_2102 | rbsK | UF70_2102 | UF70_2103 | YDGG protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.466 |
rbsK | UF70_2100 | UF70_2103 | UF70_2100 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | ThiJ/PfpI family protein. | 0.402 |
rbsK | UF70_2101 | UF70_2103 | UF70_2101 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Zinc-containing alcohol dehydrogenase. | 0.471 |
rbsK | UF70_2102 | UF70_2103 | UF70_2102 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | YDGG protein. | 0.466 |
trmD | UF70_2101 | UF70_0823 | UF70_2101 | tRNA (Guanine37-N1) -methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | Zinc-containing alcohol dehydrogenase. | 0.444 |