STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB15334.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)    
Predicted Functional Partners:
ORB15385.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.963
ORB15335.1
Prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.963
ORB15386.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.789
ORB17024.1
3-(3-hydroxyphenyl)propionate hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.720
ORB16359.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.720
mhpA
3-(3-hydroxyphenyl)propionate hydroxylase; Catalyzes the insertion of one atom of molecular oxygen into position 2 of the phenyl ring of 3-(3-hydroxyphenyl)propionate (3-HPP) and hydroxycinnamic acid (3HCI).
   
  0.720
ORB14828.1
Pentachlorophenol monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.720
BST37_13260
DUF4389 domain-containing protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.720
ORB11956.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.720
ORB11906.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.720
Your Current Organism:
Mycobacterium noviomagense
NCBI taxonomy Id: 459858
Other names: CIP 109766, DSM 45145, JCM 16367, M. noviomagense, Mycobacterium noviomagense van Ingen et al. 2009, strain NLA000500338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.