Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BST37_20230 | ORB12046.1 | BST37_20230 | BST37_17335 | Glutamate synthase; Unknown function; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.407 |
BST37_20230 | ORB12272.1 | BST37_20230 | BST37_16795 | Glutamate synthase; Unknown function; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |
BST37_20230 | ORB16758.1 | BST37_20230 | BST37_05540 | Glutamate synthase; Unknown function; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.493 |
BST37_20230 | ORB18242.1 | BST37_20230 | BST37_02145 | Glutamate synthase; Unknown function; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
BST37_20230 | mdh | BST37_20230 | BST37_02105 | Glutamate synthase; Unknown function; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.801 |
ORB12046.1 | BST37_20230 | BST37_17335 | BST37_20230 | Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Unknown function; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.407 |
ORB12272.1 | BST37_20230 | BST37_16795 | BST37_20230 | Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Unknown function; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |
ORB16758.1 | BST37_20230 | BST37_05540 | BST37_20230 | Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Unknown function; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.493 |
ORB18242.1 | BST37_20230 | BST37_02145 | BST37_20230 | Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Unknown function; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
mdh | BST37_20230 | BST37_02105 | BST37_20230 | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | Glutamate synthase; Unknown function; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.801 |