STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kynUKynureninase. (531 aa)    
Predicted Functional Partners:
kynB
Metal-dependent hydrolase.
  
 
 0.954
kmo
Kynurenine 3-monooxygenase.
 
 
 0.947
Lstg_2389
Hypothetical protein.
 
 
 0.645
aatA
Aspartate aminotransferase A.
  
 
  0.628
Lstg_1525
Cupin domain protein.
    
  0.606
katA
Catalase; Belongs to the catalase family.
   
 
  0.591
Lstg_0776
Aspartate aminotransferase.
   
 
  0.574
dapC
Aspartate aminotransferase.
   
 
  0.574
aes_1
Alpha/beta hydrolase.
  
 
 0.560
aes_2
Lipase.
  
 
 0.560
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.