Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lstg_0104 | lpxK_1 | Lstg_0104 | Lstg_0103 | Hypothetical protein. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.802 |
| Lstg_0104 | msbA | Lstg_0104 | Lstg_0102 | Hypothetical protein. | Lipid A export ATP-binding/permease MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.802 |
| Lstg_1863 | Lstg_2939 | Lstg_1863 | Lstg_2939 | acyl-CoA synthetase. | Hypothetical protein. | 0.980 |
| Lstg_1863 | dnaK | Lstg_1863 | Lstg_1744 | acyl-CoA synthetase. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.632 |
| Lstg_1863 | msbA | Lstg_1863 | Lstg_0102 | acyl-CoA synthetase. | Lipid A export ATP-binding/permease MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.886 |
| Lstg_1863 | pksJ_1 | Lstg_1863 | Lstg_1194 | acyl-CoA synthetase. | Hypothetical protein. | 0.991 |
| Lstg_1863 | pksJ_2 | Lstg_1863 | Lstg_1193 | acyl-CoA synthetase. | Hypothetical protein. | 0.999 |
| Lstg_1863 | pksL_1 | Lstg_1863 | Lstg_2827 | acyl-CoA synthetase. | Polyketide synthase. | 0.999 |
| Lstg_1863 | ppsE | Lstg_1863 | Lstg_3310 | acyl-CoA synthetase. | Polyketide synthase, type I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.999 |
| Lstg_2939 | Lstg_1863 | Lstg_2939 | Lstg_1863 | Hypothetical protein. | acyl-CoA synthetase. | 0.980 |
| Lstg_2939 | dnaK | Lstg_2939 | Lstg_1744 | Hypothetical protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.940 |
| Lstg_2939 | msbA | Lstg_2939 | Lstg_0102 | Hypothetical protein. | Lipid A export ATP-binding/permease MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.633 |
| Lstg_2939 | pksJ_2 | Lstg_2939 | Lstg_1193 | Hypothetical protein. | Hypothetical protein. | 0.401 |
| Lstg_2939 | pksL_1 | Lstg_2939 | Lstg_2827 | Hypothetical protein. | Polyketide synthase. | 0.683 |
| Lstg_2939 | ppsE | Lstg_2939 | Lstg_3310 | Hypothetical protein. | Polyketide synthase, type I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.683 |
| apxIB | msbA | Lstg_0488 | Lstg_0102 | Toxin secretion ABC transporter ATP-binding protein. | Lipid A export ATP-binding/permease MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.841 |
| dnaK | Lstg_1863 | Lstg_1744 | Lstg_1863 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | acyl-CoA synthetase. | 0.632 |
| dnaK | Lstg_2939 | Lstg_1744 | Lstg_2939 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Hypothetical protein. | 0.940 |
| dnaK | msbA | Lstg_1744 | Lstg_0102 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Lipid A export ATP-binding/permease MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.711 |
| dnaK | pksL_1 | Lstg_1744 | Lstg_2827 | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Polyketide synthase. | 0.531 |
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