Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lstg_1261 | Lstg_1863 | Lstg_1261 | Lstg_1863 | Virulence protein. | acyl-CoA synthetase. | 0.840 |
| Lstg_1261 | gloB | Lstg_1261 | Lstg_0181 | Virulence protein. | Hydroxyacylglutathione hydrolase (glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.732 |
| Lstg_1812 | Lstg_1863 | Lstg_1812 | Lstg_1863 | Sulfite reductase. | acyl-CoA synthetase. | 0.667 |
| Lstg_1812 | Lstg_2070 | Lstg_1812 | Lstg_2070 | Sulfite reductase. | NAD+-dependent formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | 0.710 |
| Lstg_1812 | gloB | Lstg_1812 | Lstg_0181 | Sulfite reductase. | Hydroxyacylglutathione hydrolase (glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.716 |
| Lstg_1812 | moeZ_3 | Lstg_1812 | Lstg_0938 | Sulfite reductase. | Thiazole biosynthesis adenylyltransferase ThiF. | 0.595 |
| Lstg_1812 | moeZ_4 | Lstg_1812 | Lstg_2961 | Sulfite reductase. | Putative molybdenum cofactor synthesis protein 3. | 0.575 |
| Lstg_1863 | Lstg_1261 | Lstg_1863 | Lstg_1261 | acyl-CoA synthetase. | Virulence protein. | 0.840 |
| Lstg_1863 | Lstg_1812 | Lstg_1863 | Lstg_1812 | acyl-CoA synthetase. | Sulfite reductase. | 0.667 |
| Lstg_1863 | Lstg_2070 | Lstg_1863 | Lstg_2070 | acyl-CoA synthetase. | NAD+-dependent formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | 0.695 |
| Lstg_1863 | Lstg_2369 | Lstg_1863 | Lstg_2369 | acyl-CoA synthetase. | Putative lyase. | 0.840 |
| Lstg_1863 | gloA | Lstg_1863 | Lstg_0701 | acyl-CoA synthetase. | Lactoylglutathione lyase. | 0.840 |
| Lstg_1863 | gloB | Lstg_1863 | Lstg_0181 | acyl-CoA synthetase. | Hydroxyacylglutathione hydrolase (glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.848 |
| Lstg_1863 | moeZ_3 | Lstg_1863 | Lstg_0938 | acyl-CoA synthetase. | Thiazole biosynthesis adenylyltransferase ThiF. | 0.967 |
| Lstg_1863 | moeZ_4 | Lstg_1863 | Lstg_2961 | acyl-CoA synthetase. | Putative molybdenum cofactor synthesis protein 3. | 0.967 |
| Lstg_1863 | yhbO | Lstg_1863 | Lstg_1515 | acyl-CoA synthetase. | Intracellular protease/amidase. | 0.411 |
| Lstg_2070 | Lstg_1812 | Lstg_2070 | Lstg_1812 | NAD+-dependent formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | Sulfite reductase. | 0.710 |
| Lstg_2070 | Lstg_1863 | Lstg_2070 | Lstg_1863 | NAD+-dependent formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | acyl-CoA synthetase. | 0.695 |
| Lstg_2070 | Lstg_2369 | Lstg_2070 | Lstg_2369 | NAD+-dependent formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | Putative lyase. | 0.660 |
| Lstg_2070 | gloA | Lstg_2070 | Lstg_0701 | NAD+-dependent formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | Lactoylglutathione lyase. | 0.660 |
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