STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fimV_1Transmembrane Tfp pilus assembly protein FimV. (842 aa)    
Predicted Functional Partners:
rpoE
Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.
  
 
   0.866
pilN
Tfp pilus assembly protein PilN.
  
    0.787
pilP
Tfp pilus assembly protein PilP.
  
    0.754
pilZ_2
Type 4 fimbrial biogenesis protein PilZ.
  
     0.731
Lstg_2730
Von Willebrand factor type A domain protein.
 
   
 0.724
cyaB_2
Guanylate/adenylate cyclase.
  
 
 0.715
Lstg_0160
Photosystem I assembly protein Ycf3.
  
     0.712
celC
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.711
Lstg_0785
SET domain protein.
  
     0.708
Lstg_1228
Calcium-transporting ATPase.
  
     0.708
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.