Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lspDType II protein secretion LspD. (792 aa)    
Predicted Functional Partners:
lspE
Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.995
lspG
Type II secretory pathway protein LspG.
 
 0.984
lspJ
Type II secretory pathway protein LspJ.
 
  
 0.978
lspK
Type II secretory pathway protein LspK.
 
   
 0.965
lspF
Type II secretory pathway protein LspF.
 
  
 0.964
lspI
Type II secretory pathway protein LspI.
 
 
 0.963
lspH
Type II secretory pathway protein LspH.
 
 
 0.961
Lstg_1022
General secretion pathway protein C.
 
 
 0.940
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
 
 0.856
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
  
0.855
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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