STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_0255Transmembrane protein. (1339 aa)    
Predicted Functional Partners:
fliH
Polar flagellar assembly protein FliH.
 
     0.861
fliI
Nucleotide binding protein FliI.
       0.802
fliJ
Flagellar protein FliJ.
       0.802
Lstg_2008
Hypothetical protein.
  
     0.702
Lstg_2118
Methyl-transferase.
  
     0.685
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.674
Lstg_0594
Putative virulence protein.
  
     0.671
Lstg_0654
Transmembrane protein.
  
     0.667
holA
DNA polymerase III, delta subunit.
 
     0.662
Lstg_3065
Initiator Replication protein.
  
     0.659
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.