STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yrbDToluene transporter subunit: membrane component of ABC superfamily protein. (158 aa)    
Predicted Functional Partners:
yrbE
Toluene transporter subunit: membrane component of ABC superfamily protein.
 
 0.999
yrbF
Toluene transporter subunit: ATP-binding component of ABC superfamily protein.
 
 0.998
ttg2D
Toluene tolerance protein Ttg2D.
 
 0.994
mlaE
ABC transporter permease.
 
 0.989
Lstg_0472
ABC transporter ATP-binding protein.
 
 0.979
Lstg_0399
Anti-anti-sigma factor.
  
 0.965
mlaA
Lipoprotein VacJ-like protein.
 
   
 0.798
ftsE
Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division.
    
  0.682
Lstg_0471
Mammalian cell entry related domain protein.
     
 0.662
Lstg_0470
Transport protein.
  
  0.601
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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