STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phbC_2PHA synthase. (596 aa)    
Predicted Functional Partners:
pta
Phosphate acetyl/butaryl transferase.
 
 0.911
PhaR
PHB/PHA accumulation regulator DNA-binding domain protein.
 
   
 0.756
Lstg_0564
Poly(3-hydroxybutyrate) depolymerase.
 
  
 0.724
Lstg_1863
acyl-CoA synthetase.
   
 
 0.723
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.718
yfcX
Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.718
cbpM
Putative chaperone-modulator protein CbpM.
       0.670
cbpA
DNA-binding protein DnaJ.
       0.668
osmY_1
Phospholipid binding protein.
       0.499
phaB_5
Acetoacetyl CoA reductase.
  
 
  0.450
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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