Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
phbC_2PHA synthase. (596 aa)    
Predicted Functional Partners:
pta
Phosphate acetyl/butaryl transferase.
 
 
 0.872
PhaR
PHB/PHA accumulation regulator DNA-binding domain protein.
 
   
 0.753
Lstg_0564
Poly(3-hydroxybutyrate) depolymerase.
 
  
 0.722
cbpA
DNA-binding protein DnaJ.
       0.668
cbpM
Putative chaperone-modulator protein CbpM.
       0.668
hmp
Oxidoreductase, FAD-binding protein.
     
  0.660
Lstg_1863
acyl-CoA synthetase.
     
 0.605
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.527
yfcX
Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.527
osmY_1
Phospholipid binding protein.
       0.499
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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