STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_0486Outer membrane component of multidrug efflux pump. (471 aa)    
Predicted Functional Partners:
cvaA
Putative membrane fusion protein.
 
  0.976
apxIB
Toxin secretion ABC transporter ATP-binding protein.
 
 
 0.965
cusB
Copper/silver efflux system, membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.858
gltR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.756
Lstg_3184
Ankyrin repeats (3 copies).
  
     0.751
Lstg_0491
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.743
Lstg_0753
Hypothetical protein.
  
     0.742
Lstg_0493
Hypothetical protein.
 
     0.723
Lstg_0601
NHL repeat protein.
  
 
  0.690
Lstg_1267
Cytochrome c type biogenesis protein CycH.
  
     0.688
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.