Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lstg_0569 | Lstg_0570 | Lstg_0569 | Lstg_0570 | Hypothetical protein. | Hypothetical protein. | 0.802 |
Lstg_0569 | oprM_5 | Lstg_0569 | Lstg_0572 | Hypothetical protein. | Outer membrane efflux protein. | 0.674 |
Lstg_0569 | yibH | Lstg_0569 | Lstg_0571 | Hypothetical protein. | Hemolysin D. | 0.835 |
Lstg_0570 | Lstg_0569 | Lstg_0570 | Lstg_0569 | Hypothetical protein. | Hypothetical protein. | 0.802 |
Lstg_0570 | oprM_5 | Lstg_0570 | Lstg_0572 | Hypothetical protein. | Outer membrane efflux protein. | 0.597 |
Lstg_0570 | yibH | Lstg_0570 | Lstg_0571 | Hypothetical protein. | Hemolysin D. | 0.788 |
oprM_5 | Lstg_0569 | Lstg_0572 | Lstg_0569 | Outer membrane efflux protein. | Hypothetical protein. | 0.674 |
oprM_5 | Lstg_0570 | Lstg_0572 | Lstg_0570 | Outer membrane efflux protein. | Hypothetical protein. | 0.597 |
oprM_5 | yibH | Lstg_0572 | Lstg_0571 | Outer membrane efflux protein. | Hemolysin D. | 0.854 |
yibH | Lstg_0569 | Lstg_0571 | Lstg_0569 | Hemolysin D. | Hypothetical protein. | 0.835 |
yibH | Lstg_0570 | Lstg_0571 | Lstg_0570 | Hemolysin D. | Hypothetical protein. | 0.788 |
yibH | oprM_5 | Lstg_0571 | Lstg_0572 | Hemolysin D. | Outer membrane efflux protein. | 0.854 |