Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ackA | fadB | Lstg_0613 | Lstg_0236 | Acetate kinase (Acetokinase); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.527 |
| ackA | pdhB_2 | Lstg_0613 | Lstg_2819 | Acetate kinase (Acetokinase); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | 0.532 |
| ackA | pta | Lstg_0613 | Lstg_0614 | Acetate kinase (Acetokinase); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Phosphate acetyl/butaryl transferase. | 0.999 |
| ackA | yfcX | Lstg_0613 | Lstg_0351 | Acetate kinase (Acetokinase); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.527 |
| fadB | ackA | Lstg_0236 | Lstg_0613 | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | Acetate kinase (Acetokinase); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.527 |
| fadB | gltA | Lstg_0236 | Lstg_1960 | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.889 |
| fadB | pdhB_2 | Lstg_0236 | Lstg_2819 | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | 0.561 |
| fadB | phbC_1 | Lstg_0236 | Lstg_0233 | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | PHA synthase. | 0.784 |
| fadB | phbC_2 | Lstg_0236 | Lstg_0462 | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | PHA synthase. | 0.718 |
| fadB | phbC_3 | Lstg_0236 | Lstg_0517 | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | PHA synthase. | 0.718 |
| fadB | phbC_4 | Lstg_0236 | Lstg_3013 | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | Polyhydroxyalkanoic synthase. | 0.718 |
| fadB | prpC | Lstg_0236 | Lstg_0637 | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.889 |
| fadB | pta | Lstg_0236 | Lstg_0614 | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | Phosphate acetyl/butaryl transferase. | 0.908 |
| fadB | yfcX | Lstg_0236 | Lstg_0351 | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.898 |
| gltA | fadB | Lstg_1960 | Lstg_0236 | Citrate synthase; Belongs to the citrate synthase family. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.889 |
| gltA | pdhB_2 | Lstg_1960 | Lstg_2819 | Citrate synthase; Belongs to the citrate synthase family. | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | 0.879 |
| gltA | pta | Lstg_1960 | Lstg_0614 | Citrate synthase; Belongs to the citrate synthase family. | Phosphate acetyl/butaryl transferase. | 0.934 |
| gltA | yfcX | Lstg_1960 | Lstg_0351 | Citrate synthase; Belongs to the citrate synthase family. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.889 |
| pdhB_2 | ackA | Lstg_2819 | Lstg_0613 | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | Acetate kinase (Acetokinase); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.532 |
| pdhB_2 | fadB | Lstg_2819 | Lstg_0236 | Pyruvate/2-oxoglutarate dehydrogenase subunit E1. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.561 |
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