Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lstg_0621 | Lstg_0763 | Lstg_0621 | Lstg_0763 | AIG2-like family protein. | Succinylglutamate desuccinylase / aspartoacylase family protein. | 0.655 |
| Lstg_0621 | Lstg_2696 | Lstg_0621 | Lstg_2696 | AIG2-like family protein. | Secreted protein. | 0.567 |
| Lstg_0621 | aroB | Lstg_0621 | Lstg_0980 | AIG2-like family protein. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.618 |
| Lstg_0621 | aroE | Lstg_0621 | Lstg_1461 | AIG2-like family protein. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.618 |
| Lstg_0621 | gcvT | Lstg_0621 | Lstg_0829 | AIG2-like family protein. | Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. | 0.689 |
| Lstg_0621 | murB_1 | Lstg_0621 | Lstg_0341 | AIG2-like family protein. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.595 |
| Lstg_0621 | murB_2 | Lstg_0621 | Lstg_1634 | AIG2-like family protein. | UDP-N-acetylenolpyruvoylglucosamine reductase. | 0.690 |
| Lstg_0621 | pepO | Lstg_0621 | Lstg_1640 | AIG2-like family protein. | Metallopeptidase PepO, peptidase, M13 family. | 0.555 |
| Lstg_0621 | trpE | Lstg_0621 | Lstg_0282 | AIG2-like family protein. | Anthranilate synthase. | 0.713 |
| Lstg_0621 | ugpA | Lstg_0621 | Lstg_0285 | AIG2-like family protein. | Sn-glycerol-3-phosphate transport system permease protein UgpA. | 0.581 |
| Lstg_0763 | Lstg_0621 | Lstg_0763 | Lstg_0621 | Succinylglutamate desuccinylase / aspartoacylase family protein. | AIG2-like family protein. | 0.655 |
| Lstg_2696 | Lstg_0621 | Lstg_2696 | Lstg_0621 | Secreted protein. | AIG2-like family protein. | 0.567 |
| aroB | Lstg_0621 | Lstg_0980 | Lstg_0621 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | AIG2-like family protein. | 0.618 |
| aroB | aroE | Lstg_0980 | Lstg_1461 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.976 |
| aroB | trpE | Lstg_0980 | Lstg_0282 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | Anthranilate synthase. | 0.582 |
| aroE | Lstg_0621 | Lstg_1461 | Lstg_0621 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | AIG2-like family protein. | 0.618 |
| aroE | aroB | Lstg_1461 | Lstg_0980 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.976 |
| aroE | trpE | Lstg_1461 | Lstg_0282 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Anthranilate synthase. | 0.875 |
| gcvT | Lstg_0621 | Lstg_0829 | Lstg_0621 | Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine. | AIG2-like family protein. | 0.689 |
| murB_1 | Lstg_0621 | Lstg_0341 | Lstg_0621 | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | AIG2-like family protein. | 0.595 |
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