Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lstg_1812 | gltA | Lstg_1812 | Lstg_1960 | Sulfite reductase. | Citrate synthase; Belongs to the citrate synthase family. | 0.530 |
| Lstg_1812 | mdh | Lstg_1812 | Lstg_3251 | Sulfite reductase. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.758 |
| Lstg_1812 | prpB | Lstg_1812 | Lstg_0638 | Sulfite reductase. | 2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. | 0.780 |
| Lstg_1812 | prpC | Lstg_1812 | Lstg_0637 | Sulfite reductase. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.530 |
| Lstg_1812 | pta | Lstg_1812 | Lstg_0614 | Sulfite reductase. | Phosphate acetyl/butaryl transferase. | 0.726 |
| acnA_2 | gltA | Lstg_2048 | Lstg_1960 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Citrate synthase; Belongs to the citrate synthase family. | 0.927 |
| acnA_2 | prpB | Lstg_2048 | Lstg_0638 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. | 0.780 |
| acnA_2 | prpC | Lstg_2048 | Lstg_0637 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.940 |
| acnA_2 | prpD | Lstg_2048 | Lstg_0636 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 2-methylcitrate dehydratase. | 0.752 |
| acnA_2 | pta | Lstg_2048 | Lstg_0614 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Phosphate acetyl/butaryl transferase. | 0.508 |
| acsB | citE | Lstg_0849 | Lstg_2303 | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. | 0.554 |
| acsB | gltA | Lstg_0849 | Lstg_1960 | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Citrate synthase; Belongs to the citrate synthase family. | 0.889 |
| acsB | prpB | Lstg_0849 | Lstg_0638 | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. | 0.801 |
| acsB | prpC | Lstg_0849 | Lstg_0637 | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 2-methylcitrate synthase; Belongs to the citrate synthase family. | 0.889 |
| acsB | prpD | Lstg_0849 | Lstg_0636 | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 2-methylcitrate dehydratase. | 0.657 |
| acsB | pta | Lstg_0849 | Lstg_0614 | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Phosphate acetyl/butaryl transferase. | 0.898 |
| citE | acsB | Lstg_2303 | Lstg_0849 | Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. | acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.554 |
| citE | gltA | Lstg_2303 | Lstg_1960 | Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.654 |
| citE | mdh | Lstg_2303 | Lstg_3251 | Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.802 |
| citE | prpB | Lstg_2303 | Lstg_0638 | Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. | 2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. | 0.779 |
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