ydgR protein (Legionella steigerwaltii) - STRING interaction network

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ydgR

Peptide transport protein. (508 aa)

Predicted Functional Partners:

mnmC

0.812

prpC

0.556

prpB

0.556

hemL

0.517

lysP_1

0.458

yveA_1

0.446

prpD

0.438

lysP_2

0.435

rubR

0.411

Your Current Organism:

Legionella steigerwaltii

NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
hemL	mnmC	Lstg_0641	Lstg_0639	Glutamate-1-semialdehyde-2,1-aminomutase.	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	0.537
hemL	prpC	Lstg_0641	Lstg_0637	Glutamate-1-semialdehyde-2,1-aminomutase.	2-methylcitrate synthase; Belongs to the citrate synthase family.	0.585
hemL	rubR	Lstg_0641	Lstg_0642	Glutamate-1-semialdehyde-2,1-aminomutase.	Rubredoxin.	0.681
hemL	ydgR	Lstg_0641	Lstg_0640	Glutamate-1-semialdehyde-2,1-aminomutase.	Peptide transport protein.	0.517
lysP_1	ydgR	Lstg_1329	Lstg_0640	Amino acid (lysine) permease.	Peptide transport protein.	0.458
lysP_1	yveA_1	Lstg_1329	Lstg_2297	Amino acid (lysine) permease.	Amino acid permease.	0.523
lysP_2	ydgR	Lstg_0928	Lstg_0640	Amino acid (lysine) permease.	Peptide transport protein.	0.435
lysP_2	yveA_1	Lstg_0928	Lstg_2297	Amino acid (lysine) permease.	Amino acid permease.	0.622
mnmC	hemL	Lstg_0639	Lstg_0641	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	Glutamate-1-semialdehyde-2,1-aminomutase.	0.537
mnmC	prpB	Lstg_0639	Lstg_0638	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.	0.762
mnmC	prpC	Lstg_0639	Lstg_0637	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	2-methylcitrate synthase; Belongs to the citrate synthase family.	0.710
mnmC	prpD	Lstg_0639	Lstg_0636	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	2-methylcitrate dehydratase.	0.461
mnmC	rubR	Lstg_0639	Lstg_0642	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	Rubredoxin.	0.441
mnmC	ydgR	Lstg_0639	Lstg_0640	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	Peptide transport protein.	0.812
prpB	mnmC	Lstg_0638	Lstg_0639	2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	0.762
prpB	prpC	Lstg_0638	Lstg_0637	2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.	2-methylcitrate synthase; Belongs to the citrate synthase family.	0.994
prpB	prpD	Lstg_0638	Lstg_0636	2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.	2-methylcitrate dehydratase.	0.993
prpB	ydgR	Lstg_0638	Lstg_0640	2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.	Peptide transport protein.	0.556
prpC	hemL	Lstg_0637	Lstg_0641	2-methylcitrate synthase; Belongs to the citrate synthase family.	Glutamate-1-semialdehyde-2,1-aminomutase.	0.585
prpC	mnmC	Lstg_0637	Lstg_0639	2-methylcitrate synthase; Belongs to the citrate synthase family.	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	0.710