STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prs_1Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family. (297 aa)    
Predicted Functional Partners:
pdhB_2
Pyruvate/2-oxoglutarate dehydrogenase subunit E1.
   
 0.990
pdp_1
Thymidine phosphorylase.
 
  
 0.959
odpB
Pyruvate dehydrogenase E1 subunit beta.
   
 0.958
Lstg_0651
ATP cone domain protein.
 
   
 0.857
sucA
2-oxoglutarate dehydrogenase E1.
    
 0.857
pdp_2
Thymidine phosphorylase.
 
  
 0.826
Lstg_0648
Metallo-beta lactamase family transporter protein.
 
     0.810
gor
Glutathione reductase.
   
 0.767
merA
Oxydoreductase.
   
 0.767
lpdA
Dihydrolipoyl dehydrogenase.
   
 0.767
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.