Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lstg_0654 | hisS | Lstg_0654 | Lstg_0655 | Transmembrane protein. | histidyl-tRNA synthetase. | 0.944 |
| Lstg_0654 | pilF | Lstg_0654 | Lstg_0657 | Transmembrane protein. | Twitching motility protein PilF. | 0.807 |
| Lstg_0654 | rodZ | Lstg_0654 | Lstg_0656 | Transmembrane protein. | DNA-binding protein. | 0.835 |
| Lstg_1910 | pilF | Lstg_1910 | Lstg_0657 | Hypothetical protein. | Twitching motility protein PilF. | 0.704 |
| Lstg_1910 | pilN | Lstg_1910 | Lstg_0985 | Hypothetical protein. | Tfp pilus assembly protein PilN. | 0.535 |
| Lstg_1910 | pilO | Lstg_1910 | Lstg_0984 | Hypothetical protein. | Tfp pilus assembly protein PilO. | 0.415 |
| Lstg_1910 | pilP | Lstg_1910 | Lstg_0983 | Hypothetical protein. | Tfp pilus assembly protein PilP. | 0.598 |
| cyaA_1 | ndk | Lstg_2655 | Lstg_0659 | Adenylate/guanylate cyclase transmembrane protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.710 |
| cyaA_1 | pilF | Lstg_2655 | Lstg_0657 | Adenylate/guanylate cyclase transmembrane protein. | Twitching motility protein PilF. | 0.723 |
| cyaA_1 | ribA | Lstg_2655 | Lstg_0060 | Adenylate/guanylate cyclase transmembrane protein. | Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.682 |
| hisS | Lstg_0654 | Lstg_0655 | Lstg_0654 | histidyl-tRNA synthetase. | Transmembrane protein. | 0.944 |
| hisS | ndk | Lstg_0655 | Lstg_0659 | histidyl-tRNA synthetase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.457 |
| hisS | pilF | Lstg_0655 | Lstg_0657 | histidyl-tRNA synthetase. | Twitching motility protein PilF. | 0.802 |
| hisS | ribA | Lstg_0655 | Lstg_0060 | histidyl-tRNA synthetase. | Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.490 |
| hisS | rodZ | Lstg_0655 | Lstg_0656 | histidyl-tRNA synthetase. | DNA-binding protein. | 0.816 |
| ndk | cyaA_1 | Lstg_0659 | Lstg_2655 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Adenylate/guanylate cyclase transmembrane protein. | 0.710 |
| ndk | hisS | Lstg_0659 | Lstg_0655 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | histidyl-tRNA synthetase. | 0.457 |
| ndk | pilF | Lstg_0659 | Lstg_0657 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Twitching motility protein PilF. | 0.763 |
| ndk | ribA | Lstg_0659 | Lstg_0060 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.815 |
| pilF | Lstg_0654 | Lstg_0657 | Lstg_0654 | Twitching motility protein PilF. | Transmembrane protein. | 0.807 |
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