Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lstg_0786Glutathione synthase/ribosomal protein S6 modification enzyme. (317 aa)    
Predicted Functional Partners:
Lstg_0787
Membrane-associated HD superfamily hydrolase.
 
    0.961
Lstg_0788
Secreted protein.
 
     0.954
Lstg_0789
Transmembrane protein.
       0.621
lpoA
Lipoprotein.
  
     0.562
argF
Ornithine carbamoyltransferase.
    
  0.490
gshA
Glutamate--cysteine ligase.
    
 0.472
ybdK
Carboxylate-amine ligase YbdK.
    
 0.470
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
  0.435
cphA_1
Cyanophycin synthetase.
    
  0.434
cphA_2
Cyanophycin synthetase.
    
  0.434
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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