STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vipFHypothetical protein; N-terminal GNAT family acetyltransferase. (294 aa)    
Predicted Functional Partners:
Lstg_0809
Hypothetical protein.
       0.617
Lstg_1605
Protein IcmE (DotG).
  
     0.541
fabF-2
3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.508
Lstg_0904
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.497
dotA
Defect in organelle trafficking protein DotA.
  
     0.475
Lstg_2008
Hypothetical protein.
  
     0.454
Lstg_0810
Hypothetical protein.
       0.436
Lstg_1803
Glycoprotease.
  
 0.436
Lstg_2490
Putative helicase/relaxase.
  
     0.424
Lstg_3212
GNAT family acetyltransferase.
  
  
  0.421
Your Current Organism:
Legionella steigerwaltii
NCBI taxonomy Id: 460
Other names: ATCC 35302, CCUG 29674, CCUG 56441, CIP 103851, DSM 23076, JCM 7558, L. steigerwaltii, NCTC 11991, strain SC-18-C9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.